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Opigno Enterprise API provides mutations to update the read status of notifications for the current user.

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Single notification

To mark a single notification as read, readNotification mutation should be executed. It has one required incoming argument - notificationId. Use this mutation to indicate that a notification has been viewed, ensuring it no longer appears as unread for the current API user. Response returns the updated Notification object. 
mutation readNotification {
  readNotification(notificationId: 1) {
    response {
      id
      status
    }
    errors
  }
}

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All notifications

To mark all notifications related to the current API user as read, use mutation readAllNotifications. If the mutation executed without any errors, a boolean value will be returned as a response indicating the execution status. 
mutation readAllNotifications {
  readNotification {
    response
    errors
  }
}